Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
H2AFY
Entrez Gene ID
9555
Gene Name
H2A histone family member Y
Gene Aliases
H2A.y, H2A/y, H2AF12M, MACROH2A1.1, mH2A1, macroH2A1.2
Chromosome Location
Chr.5: 135334381 - 135399887 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
GenBank mRNA AK023833.1 - 1 - 1 5764 113


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AU158717.1 - 1 Chr. 5 - 135351582 - 135352080 [+] on Build GRCh38 113
GenBankmRNA DB358346.1 - 1 Chr. 5 - 135351744 - 135352294 [+] on Build GRCh38 114
GenBankmRNA BQ334796.1 - 1 Chr. 5 - 135351823 - 135352085 [+] on Build GRCh38 114
GenBankmRNA AW080273.1 - 1 Chr. 5 - 135351744 - 135352268 [+] on Build GRCh38 113
GenBankmRNA DA463499.1 - 1 413 Chr. 5 - 135351808 - 135352363 [-] on Build GRCh38 113
GenBankmRNA BF901854.1 - 1 Chr. 5 - 135351798 - 135352124 [+] on Build GRCh38 113


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream chromosome 5 open reading frame 66 C5orf66 -7.1kb Sense Chr. - 135033280 - 135344680 on Build GRCh38
Downstream dendritic cell associated nuclear protein DCANP1 C5orf20, DCNP1 91.9kb Anti-sense Chr. - 135444214 - 135447348 on Build GRCh38

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