Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
ARHGEF6
Entrez Gene ID
9459
Gene Name
Rac/Cdc42 guanine nucleotide exchange factor 6
Gene Aliases
COOL2, Cool-2, MRX46, PIXA, alpha-PIX, alphaPIX
Chromosome Location
Chr.X: 136665547 - 136781656 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq XM_005262499.2 XP_005262556.1 1 - 1 322 56
XM_011531412.2 XP_011529714.1 1 - 1 322 56
XM_011531413.1 XP_011529715.1 1 - 1 322 56
XM_011531414.1 XP_011529716.1 1 - 1 322 56
XM_017029975.1 XP_016885464.1 1 - 1 322 56
GenBank mRNA AF207831.1 - 1 - 1 754 56


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DA112326.1 - 1 322 Chr. X - 136781126 - 136781656 [-] on Build GRCh38 56


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream CD40 ligand CD40LG CD154, CD40L, HIGM1, IGM, IMD3, T-BAM, TNFSF5, TRAP, gp39, hCD40L -120.5kb Anti-sense Chr. - 136648177 - 136660390 on Build GRCh38
Downstream RNA binding motif protein, X-linked RBMX HNRNPG, HNRPG, MRXS11, RBMXP1, RBMXRT, RNMX, hnRNP-G 87.1kb Sense Chr. - 136869194 - 136880780 on Build GRCh38

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