Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
HEMK1
Entrez Gene ID
51409
Gene Name
HemK methyltransferase family member 1
Gene Aliases
HEMK, MTQ1
Chromosome Location
Chr.3: 50569152 - 50589050 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq XM_011533806.2 XP_011532108.1 11 - 11 8852 87
XM_011533807.1 XP_011532109.1 11 - 11 8737 87
XM_011533808.1 XP_011532110.1 11 - 11 8523 87
XM_011533809.2 XP_011532111.1 12 - 12 8449 87
XM_011533810.2 XP_011532112.1 12 - 12 6492 87
XM_011533812.2 XP_011532114.1 9 - 9 8696 87
XM_011533813.2 XP_011532115.1 11 - 11 8890 87
XM_011533814.2 XP_011532116.1 11 - 11 8814 87
GenBank mRNA AF074992.1 - 1 - 1 353 87


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AA401975.1 - 1 Chr. 3 - 50588455 - 50589046 [-] on Build GRCh38 87
GenBankmRNA AW592362.1 - 1 Chr. 3 - 50588665 - 50589048 [-] on Build GRCh38 87
GenBankmRNA AW003285.1 - 1 Chr. 3 - 50588484 - 50589045 [-] on Build GRCh38 87
GenBankmRNA AA293435.1 - 1 Chr. 3 - 50588573 - 50589046 [-] on Build GRCh38 87
GenBankmRNA AA429357.1 - 1 Chr. 3 - 50588577 - 50589046 [-] on Build GRCh38 87
GenBankmRNA AW016453.1 - 1 Chr. 3 - 50588665 - 50589050 [-] on Build GRCh38 87
GenBankmRNA BQ025558.1 - 1 Chr. 3 - 50588535 - 50589050 [-] on Build GRCh38 87
GenBankmRNA BX113747.1 - 1 350 Chr. 3 - 50588537 - 50589050 [+] on Build GRCh38 87
GenBankmRNA AI143776.1 - 1 Chr. 3 - 50588539 - 50589029 [-] on Build GRCh38 87


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream chromosome 3 open reading frame 18 C3orf18 G20 -14.5kb Anti-sense Chr. - 50558025 - 50574835 on Build GRCh38
Downstream cytokine inducible SH2 containing protein CISH BACTS2, CIS, CIS-1, G18, SOCS 17.4kb Anti-sense Chr. - 50606454 - 50611831 on Build GRCh38

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