Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: PHYA
Entrez Gene ID: 837483
Gene Name: phytochrome A
Gene Aliases: AT1G09570, ELONGATED HYPOCOTYL 8, F14J9.23, F14J9_23, FAR RED ELONGATED 1, FAR RED ELONGATED HYPOCOTYL 2, FHY2, FRE1, HY8, phytochrome A
Chromosome Location: Chr.1: 3095160 - 3100819 on Build TAIR10.1

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001123784.1	NP_001117256.1	5 - 6	3292	101
	NM_001331840.1	NP_001322906.1	4 - 5	3580	101
	NM_001331841.1	NP_001322909.1	4 - 5	3342	101
	NM_001331842.1	NP_001322908.1	4 - 5	4101	101
	NM_001331843.1	NP_001322907.1	4 - 5	4055	101
	NM_100828.4	NP_172428.1	4 - 5	3845	101
GenBank mRNA	AY039520.1	-	4 - 5	3292	101