Product Details
- SNP ID
-
rs147552267
- Assay Type
- Functionally Tested
- NCBI dbSNP Submissions
-
NA
- Location
-
Chr.13:27435748 on Build GRCh38
- Set Membership
-
- Context Sequence [VIC/FAM]
- CAAAGTGTCTCTTTCCTGGGTCTCT[G/T]GAGTTTCTTTATATGCCTTCTCCTC
- Phenotype
-
MIM: 600860
- Polymorphism
- G/T, Transversion Substitution
- Allele Nomenclature
-
- Literature Links
-
GTF3A
PubMed Links
- Additional Information
-
For this assay, SNP(s) [rs1218825] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Gene Details
- Gene
- GTF3A
- Gene Name
- general transcription factor IIIA
Transcript Accession |
SNP Location |
SNP Type |
Codon Change |
Amino Acid Change |
Protein ID |
NM_002097.2 |
1652 |
Intron |
|
|
NP_002088.2 |
- Gene
- MTIF3
- Gene Name
- mitochondrial translational initiation factor 3
Transcript Accession |
SNP Location |
SNP Type |
Codon Change |
Amino Acid Change |
Protein ID |
NM_001166261.1 |
1652 |
Intron |
|
|
NP_001159733.1 |
NM_001166262.1 |
1652 |
Intron |
|
|
NP_001159734.1 |
NM_001166263.1 |
1652 |
Missense Mutation |
CAA,CCA |
Q255P |
NP_001159735.1 |
NM_152912.4 |
1652 |
Intron |
|
|
NP_690876.3 |
XM_006719771.3 |
1652 |
Missense Mutation |
CAA,CCA |
Q255P |
XP_006719834.1 |
XM_006719772.3 |
1652 |
Missense Mutation |
CAA,CCA |
Q255P |
XP_006719835.1 |
XM_011534957.2 |
1652 |
Missense Mutation |
CAA,CCA |
Q255P |
XP_011533259.1 |
XM_011534958.2 |
1652 |
Missense Mutation |
CAA,CCA |
Q255P |
XP_011533260.1 |
XM_011534959.2 |
1652 |
Missense Mutation |
CAA,CCA |
Q255P |
XP_011533261.1 |
XM_011534960.2 |
1652 |
Missense Mutation |
CAA,CCA |
Q255P |
XP_011533262.1 |
XM_011534961.2 |
1652 |
Missense Mutation |
CAA,CCA |
Q255P |
XP_011533263.1 |
XM_011534962.2 |
1652 |
Missense Mutation |
CAA,CCA |
Q255P |
XP_011533264.1 |
XM_011534963.2 |
1652 |
Missense Mutation |
CAA,CCA |
Q255P |
XP_011533265.1 |
XM_017020417.1 |
1652 |
Intron |
|
|
XP_016875906.1 |
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