Product Details

SNP ID

rs148171978

Assay Type

Functionally Tested

NCBI dbSNP Submissions

7

Location

Chr.1:172441842 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

AGGTAGAATGGACACAGACATGAGA[C/T]AGACATCAGCAGAAGGGCAAAGAGT

Phenotype

MIM: 601730

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

C1orf105 PubMed Links

Additional Information

For this assay, SNP(s) [rs1063412] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

C1orf105

Gene Name

chromosome 1 open reading frame 105

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001300760.1		Intron			NP_001287689.1
NM_139240.3		Intron			NP_640333.3
XM_005245608.2		Intron			XP_005245665.1
XM_005245610.3		Intron			XP_005245667.1
XM_006711630.2		Intron			XP_006711693.1
XM_011510152.2		Intron			XP_011508454.1
XM_011510153.2		Intron			XP_011508455.1
XM_011510154.2		Intron			XP_011508456.1
XM_011510155.2		Intron			XP_011508457.1
XM_011510156.2		Intron			XP_011508458.1
XM_017002808.1		Intron			XP_016858297.1

Gene

PIGC

Gene Name

phosphatidylinositol glycan anchor biosynthesis class C

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_002642.3		Intron			NP_002633.1
NM_153747.1		Intron			NP_714969.1

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