Product Details

SNP ID

rs137936040

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.6:31166028 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GGCAAATTGCTCGAGTTCTTTCTGC[A/G]GAGCTTTGATGTCCTGGGACTGGAT

Phenotype

MIM: 605310 MIM: 164177 MIM: 600912

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

CCHCR1 PubMed Links

Additional Information

For this assay, SNP(s) [rs9501063] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CCHCR1

Gene Name

coiled-coil alpha-helical rod protein 1

There are no transcripts associated with this gene.

Gene

POU5F1

Gene Name

POU class 5 homeobox 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001173531.2	1143	UTR 5			NP_001167002.1
NM_001285986.1	1143	UTR 5			NP_001272915.1
NM_001285987.1	1143	Missense Mutation	CCG,CTG	P47L	NP_001272916.1
NM_002701.5	1143	Intron			NP_002692.2
NM_203289.5	1143	UTR 5			NP_976034.4

Gene

PSORS1C3

Gene Name

psoriasis susceptibility 1 candidate 3 (non-protein coding)

There are no transcripts associated with this gene.

Gene

TCF19

Gene Name

transcription factor 19

There are no transcripts associated with this gene.

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