Product Details

SNP ID

rs148750226

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.6:25726203 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

AGCAGCACTGCCTGAATGTTAGGCA[A/G]GACTCCGCCCTGGGCAATGGTCACG

Phenotype

MIM: 613499 MIM: 609904 MIM: 182308

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

HIST1H2AA PubMed Links

Additional Information

For this assay, SNP(s) [rs6940348] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

HIST1H2AA

Gene Name

histone cluster 1, H2aa

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_170745.3	360	Silent Mutation	CTG,TTG	L109L	NP_734466.1

Gene

HIST1H2APS1

Gene Name

histone cluster 1, H2a, pseudogene 1

There are no transcripts associated with this gene.

Gene

HIST1H2BA

Gene Name

histone cluster 1, H2ba

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_170610.2	360	Intron			NP_733759.1

Gene

SLC17A1

Gene Name

solute carrier family 17 member 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_005074.3	360	Intron			NP_005065.2
XM_011514818.2	360	Intron			XP_011513120.2
XM_011514819.2	360	Intron			XP_011513121.2
XM_011514820.2	360	Intron			XP_011513122.2
XM_011514821.2	360	Intron			XP_011513123.1
XM_017011199.1	360	Intron			XP_016866688.1
XM_017011200.1	360	Intron			XP_016866689.1
XM_017011201.1	360	Intron			XP_016866690.1
XM_017011202.1	360	Intron			XP_016866691.1

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