Product Details

SNP ID

rs11189222

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:97441820 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TTTTTTTTTTTTTTTAAATCTTTTC[A/C]CAACTTGCCCTTCAGAGAGGTATAG

Phenotype

MIM: 606493 MIM: 172250 MIM: 616750

Polymorphism

A/C, Transversion Substitution

Allele Nomenclature

Literature Links

EXOSC1 PubMed Links

Additional Information

For this assay, SNP(s) [rs12784013] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

EXOSC1

Gene Name

exosome component 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001318362.1		Intron			NP_001305291.1
NM_001318363.1		Intron			NP_001305292.1
NM_001318364.1		Intron			NP_001305293.1
NM_001318365.1		Intron			NP_001305294.1
NM_001318366.1		Intron			NP_001305295.1
NM_016046.4		Intron			NP_057130.1
XM_011539847.2		Intron			XP_011538149.1
XM_017016304.1		Intron			XP_016871793.1

Gene

PGAM1

Gene Name

phosphoglycerate mutase 1

There are no transcripts associated with this gene.

Gene

ZDHHC16

Gene Name

zinc finger DHHC-type containing 16

There are no transcripts associated with this gene.

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