Product Details

SNP ID

rs11988053

Assay Type

Validated

NCBI dbSNP Submissions

NA

Location

Chr.8:66113265 on Build GRCh38

Set Membership

Validated

Context Sequence [VIC/FAM]

ACACAGGCCGGCTCTGGGGCTCTGC[G/T]CTCCTCGGATTACGCATGCTCAGTG

Phenotype

MIM: 606469

Polymorphism

G/T, Transversion Substitution

Allele Nomenclature

Literature Links

TRIM55 PubMed Links

Additional Information

For this assay, SNP(s) [rs79140417] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

TRIM55

Gene Name

tripartite motif containing 55

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_033058.2	100	Intron			NP_149047.2
NM_184085.1	100	Intron			NP_908973.1
NM_184086.1	100	Intron			NP_908974.1
NM_184087.1	100	Intron			NP_908975.1
XM_005251316.4	100	Intron			XP_005251373.1
XM_011517613.2	100	Intron			XP_011515915.1
XM_011517614.2	100	Intron			XP_011515916.1
XM_011517615.2	100	Intron			XP_011515917.1
XM_011517616.2	100	Intron			XP_011515918.1
XM_011517617.2	100	UTR 5			XP_011515919.1
XM_017013908.1	100	Intron			XP_016869397.1
XM_017013909.1	100	Intron			XP_016869398.1

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