Product Details

SNP ID

rs41307763

Assay Type

Functionally Tested

NCBI dbSNP Submissions

34

Location

Chr.1:16398835 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

AGAGTTGTGTTCCCTGGGGAGAGGA[A/G]TAGGGCAGAAGGGTGGGAGACATGT

Phenotype

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

SPATA21 PubMed Links

Additional Information

For this assay, SNP(s) [rs147405482] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

SPATA21

Gene Name

spermatogenesis associated 21

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_198546.1	2856	Intron			NP_940948.1
XM_011541407.2	2856	Intron			XP_011539709.1
XM_011541417.2	2856	Intron			XP_011539719.1
XM_017001216.1	2856	UTR 3			XP_016856705.1
XM_017001217.1	2856	UTR 3			XP_016856706.1
XM_017001218.1	2856	Intron			XP_016856707.1
XM_017001219.1	2856	Intron			XP_016856708.1
XM_017001220.1	2856	UTR 3			XP_016856709.1
XM_017001221.1	2856	UTR 3			XP_016856710.1
XM_017001222.1	2856	UTR 3			XP_016856711.1
XM_017001223.1	2856	UTR 3			XP_016856712.1
XM_017001224.1	2856	Intron			XP_016856713.1
XM_017001225.1	2856	UTR 3			XP_016856714.1

Gene

SZRD1

Gene Name

SUZ RNA binding domain containing 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001114600.2	2856	Intron			NP_001108072.1
NM_001271869.1	2856	Intron			NP_001258798.1

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