Product Details

SNP ID

rs9831052

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:112121257 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GTCTACTTCCACAATGGTCCAGTGG[C/T]CATGTGAAAAATTCTAGCATAAACT

Phenotype

MIM: 611956 MIM: 607792

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

C3orf52 PubMed Links

Additional Information

For this assay, SNP(s) [rs114214934] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

C3orf52

Gene Name

chromosome 3 open reading frame 52

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001171747.1	2855	Intron			NP_001165218.1
NM_024616.2	2855	Intron			NP_078892.2
XM_011513133.2	2855	Intron			XP_011511435.1
XM_017007181.1	2855	Intron			XP_016862670.1

Gene

GCSAM

Gene Name

germinal center associated signaling and motility

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001190259.1	2855	UTR 3			NP_001177188.1
NM_001190260.1	2855	UTR 3			NP_001177189.1
NM_152785.4	2855	UTR 3			NP_689998.1
XM_005247272.2	2855	UTR 3			XP_005247329.1
XM_011512627.2	2855	UTR 3			XP_011510929.1
XM_011512628.2	2855	UTR 3			XP_011510930.1
XM_011512629.1	2855	UTR 3			XP_011510931.1
XM_011512630.1	2855	UTR 3			XP_011510932.1

Gene

MIR567

Gene Name

microRNA 567

There are no transcripts associated with this gene.

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