Product Details

SNP ID

rs13407605

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:74518265 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

GCTAAGGAAAGAGTCCTTCCCTATG[C/T]AGACTGTGGTTTACCCCATTCTTTC

Phenotype

MIM: 602434 MIM: 610231 MIM: 604240

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

AUP1 PubMed Links

Additional Information

For this assay, SNP(s) [rs140478168] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

AUP1

Gene Name

ancient ubiquitous protein 1

There are no transcripts associated with this gene.

Gene

DQX1

Gene Name

DEAQ-box RNA dependent ATPase 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_133637.2	1788	UTR 3			NP_598376.2
XM_011532644.1	1788	UTR 3			XP_011530946.1
XM_011532645.1	1788	UTR 3			XP_011530947.1
XM_011532646.2	1788	Intron			XP_011530948.1
XM_017003520.1	1788	UTR 3			XP_016859009.1

Gene

PCGF1

Gene Name

polycomb group ring finger 1

There are no transcripts associated with this gene.

Gene

TLX2

Gene Name

T-cell leukemia homeobox 2

There are no transcripts associated with this gene.

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