Product Details

SNP ID

rs13177669

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.5:35048497 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TACCAAATAGCTAGGTAAGGTTCTG[C/G]ACAGCTGTGGATCATCTTATGTGTC

Phenotype

MIM: 612471 MIM: 176761

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

AGXT2 PubMed Links

Additional Information

For this assay, SNP(s) [rs74506298] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

AGXT2

Gene Name

alanine--glyoxylate aminotransferase 2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001306173.1	1626	Intron			NP_001293102.1
NM_031900.3	1626	Intron			NP_114106.1
XM_005248337.2	1626	Intron			XP_005248394.1
XM_005248338.2	1626	Intron			XP_005248395.1
XM_017009748.1	1626	Intron			XP_016865237.1

Gene

PRLR

Gene Name

prolactin receptor

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_000949.6	1626	Intron			NP_000940.1
NM_001204314.2	1626	Intron			NP_001191243.1
NM_001204315.1	1626	Intron			NP_001191244.1
NM_001204316.1	1626	Intron			NP_001191245.1
NM_001204317.1	1626	Intron			NP_001191246.1
NM_001204318.1	1626	Intron			NP_001191247.1
XM_006714484.2	1626	Intron			XP_006714547.1
XM_011514068.2	1626	Intron			XP_011512370.1
XM_011514069.2	1626	Intron			XP_011512371.1
XM_017009645.1	1626	Intron			XP_016865134.1
XM_017009646.1	1626	UTR 3			XP_016865135.1

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