Product Details

SNP ID

rs3189441

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.7:157539700 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CGCAGTGCGTGCAGGTCGCCCTGAT[T/C]TCCTCTCCCGGGAGGGAAATGCTCG

Phenotype

MIM: 601698

Polymorphism

T/C, Transition Substitution

Allele Nomenclature

Literature Links

PTPRN2 PubMed Links

Additional Information

For this assay, SNP(s) [rs201284576] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PTPRN2

Gene Name

protein tyrosine phosphatase, receptor type N2

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001308267.1	4195	UTR 3			NP_001295196.1
NM_001308268.1	4195	UTR 3			NP_001295197.1
NM_002847.4	4195	UTR 3			NP_002838.2
NM_130842.3	4195	UTR 3			NP_570857.2
NM_130843.3	4195	UTR 3			NP_570858.2
XM_011516446.1	4195	Intron			XP_011514748.1
XM_011516447.2	4195	Intron			XP_011514749.1
XM_011516448.2	4195	Intron			XP_011514750.1
XM_011516449.2	4195	Intron			XP_011514751.1
XM_017012475.1	4195	UTR 3			XP_016867964.1
XM_017012476.1	4195	Intron			XP_016867965.1

View Full Product Details