Product Details

SNP ID

rs28778946

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.16:81103600 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TCAGCTGGGGAATGGATAAGCACAT[C/G]GTTGTTTTACCCACACAATGAAATA

Phenotype

MIM: 238330 MIM: 607894

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

GCSH PubMed Links

Additional Information

For this assay, SNP(s) [rs79546329] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GCSH

Gene Name

glycine cleavage system protein H

There are no transcripts associated with this gene.

Gene

PKD1L2

Gene Name

polycystin 1 like 2 (gene/pseudogene)

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001076780.1		Intron			NP_001070248.1
NM_001278423.1		Intron			NP_001265352.1
NM_001278425.1		Intron			NP_001265354.1
NM_052892.3		Intron			NP_443124.3

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