Product Details

SNP ID
rs62039479
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.16:15038046 on Build GRCh38
Set Membership
Context Sequence [VIC/FAM]
TTCATGTTTTTTAACTTCCTGGAGA[A/G]GAGATCTTTTCCCACAAGCCATCTT
Phenotype
MIM: 615367 MIM: 614244
Polymorphism
A/G, Transition Substitution
Allele Nomenclature
Literature Links
NTAN1 PubMed Links
Additional Information
For this assay, SNP(s) [rs1136001] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
NTAN1
Gene Name
N-terminal asparagine amidase
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001270766.1 861 Intron NP_001257695.1
NM_001270767.1 861 Intron NP_001257696.1
NM_173474.3 861 Intron NP_775745.1
XM_011522355.2 861 Silent Mutation TCC,TCT S223S XP_011520657.1
Gene
PDXDC1
Gene Name
pyridoxal dependent decarboxylase domain containing 1
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001285444.1 861 UTR 3 NP_001272373.1
NM_001285445.1 861 UTR 3 NP_001272374.1
NM_001285447.1 861 UTR 3 NP_001272376.1
NM_001285448.1 861 UTR 3 NP_001272377.1
NM_001285449.1 861 Intron NP_001272378.1
NM_001285450.1 861 Intron NP_001272379.1
NM_001324019.1 861 UTR 3 NP_001310948.1
NM_001324020.1 861 Intron NP_001310949.1
NM_001324021.1 861 Intron NP_001310950.1
NM_015027.3 861 UTR 3 NP_055842.2
XM_005255173.1 861 Intron XP_005255230.1
XM_005255176.2 861 Intron XP_005255233.1
XM_006720865.2 861 Intron XP_006720928.2
XM_017023059.1 861 Intron XP_016878548.1
XM_017023060.1 861 Intron XP_016878549.1
XM_017023061.1 861 Intron XP_016878550.1
XM_017023062.1 861 Intron XP_016878551.1
XM_017023063.1 861 Intron XP_016878552.1
XM_017023064.1 861 Intron XP_016878553.1
XM_017023065.1 861 Intron XP_016878554.1

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