Product Details

SNP ID

rs340832

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:3067948 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

AGAGGCAGTTTCCACAATGCCAACT[C/G]TCTGGGTTGTGGTTTGAAAGAGATC

Phenotype

MIM: 607280 MIM: 147851

Polymorphism

C/G, Transversion Substitution

Allele Nomenclature

Literature Links

CNTN4 PubMed Links

Additional Information

For this assay, SNP(s) [rs77247039] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CNTN4

Gene Name

contactin 4

There are no transcripts associated with this gene.

Gene

CNTN4-AS1

Gene Name

CNTN4 antisense RNA 1

There are no transcripts associated with this gene.

Gene

IL5RA

Gene Name

interleukin 5 receptor subunit alpha

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_000564.4	4115	UTR 3			NP_000555.2
NM_001243099.1	4115	UTR 3			NP_001230028.1
NM_175724.2	4115	Intron			NP_783851.1
NM_175725.2	4115	Intron			NP_783852.1
NM_175726.3	4115	UTR 3			NP_783853.1
NM_175727.2	4115	Intron			NP_783854.1
NM_175728.2	4115	Intron			NP_783855.1
XM_011533677.2	4115	UTR 3			XP_011531979.1
XM_011533678.2	4115	UTR 3			XP_011531980.1

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