Product Details

SNP ID

rs1783541

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.11:65527328 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CCCAATAATAGTACAGGTTGAGCAT[C/T]CCTAATCCGAAAATGCATGATCTAC

Phenotype

MIM: 607982

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

SCYL1 PubMed Links

Additional Information

For this assay, SNP(s) [rs1787663] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

SCYL1

Gene Name

SCY1 like pseudokinase 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001048218.1		Intron			NP_001041683.1
NM_020680.3		Intron			NP_065731.3
XM_005274118.3		Intron			XP_005274175.1
XM_005274120.3		Intron			XP_005274177.1
XM_005274121.3		Intron			XP_005274178.1
XM_017018029.1		Intron			XP_016873518.1
XM_017018030.1		Intron			XP_016873519.1
XM_017018031.1		Intron			XP_016873520.1
XM_017018032.1		Intron			XP_016873521.1
XM_017018033.1		Intron			XP_016873522.1

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