Product Details

SNP ID

rs7586188

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:44317816 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TAACTACAAATAAAATAGGGCTTCC[A/G]AATTATGTCTAAATAATACAATAAT

Phenotype

MIM: 609557 MIM: 104614

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

PREPL PubMed Links

Additional Information

For this assay, SNP(s) [rs142090460] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PREPL

Gene Name

prolyl endopeptidase-like

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001042385.2	5687	UTR 3			NP_001035844.1
NM_001042386.2	5687	UTR 3			NP_001035845.1
NM_001171603.1	5687	UTR 3			NP_001165074.1
NM_001171606.1	5687	UTR 3			NP_001165077.1
NM_001171613.1	5687	UTR 3			NP_001165084.1
NM_001171617.1	5687	UTR 3			NP_001165088.1
NM_006036.4	5687	UTR 3			NP_006027.2
XM_011533198.1	5687	Intron			XP_011531500.1
XM_011533200.1	5687	Intron			XP_011531502.1
XM_011533202.1	5687	Intron			XP_011531504.1
XM_017005384.1	5687	Intron			XP_016860873.1
XM_017005385.1	5687	Intron			XP_016860874.1

Gene

SLC3A1

Gene Name

solute carrier family 3 member 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_000341.3	5687	Intron			NP_000332.2
XM_011533047.2	5687	Intron			XP_011531349.1

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