Product Details

SNP ID

rs11721

Assay Type

Validated

NCBI dbSNP Submissions

51

Location

Chr.1:1217251 on Build GRCh38

Set Membership

HapMap Validated

Context Sequence [VIC/FAM]

GATTTCGTTCTCAGAAGTGAGATGC[C/A]ACGATTTCGAGGGACCAGGGAGGAG

Phenotype

MIM: 614282 MIM: 603905 MIM: 600315

Polymorphism

C/A, Transversion Substitution

Allele Nomenclature

Literature Links

SDF4 PubMed Links

Additional Information

For this assay, SNP(s) [rs74355107] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

SDF4

Gene Name

stromal cell derived factor 4

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_016176.3	1795	UTR 3			NP_057260.2
NM_016547.2	1795	UTR 3			NP_057631.1
XM_011541556.1	1795	Intron			XP_011539858.1

Gene

TNFRSF18

Gene Name

TNF receptor superfamily member 18

There are no transcripts associated with this gene.

Gene

TNFRSF4

Gene Name

TNF receptor superfamily member 4

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_003327.3	1795	Intron			NP_003318.1
XM_011542074.2	1795	Intron			XP_011540376.1
XM_011542075.2	1795	Intron			XP_011540377.1
XM_011542076.2	1795	Intron			XP_011540378.1
XM_011542077.2	1795	Intron			XP_011540379.1
XM_017002231.1	1795	Intron			XP_016857720.1
XM_017002232.1	1795	Intron			XP_016857721.1

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