Product Details

SNP ID

rs1254946

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:124466266 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

AAGCACACAGCAGGATGCACGGTGC[A/G]CTGTTTCTGGTATAGAAAATGCAGA

Phenotype

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

LHPP PubMed Links

Additional Information

For this assay, SNP(s) [rs118177680] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LHPP

Gene Name

phospholysine phosphohistidine inorganic pyrophosphate phosphatase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001167880.1		Intron			NP_001161352.1
NM_001318331.1		Intron			NP_001305260.1
NM_001318332.1		Intron			NP_001305261.1
NM_022126.3		Intron			NP_071409.3
XM_005270026.3		Intron			XP_005270083.1
XM_006717943.1		Intron			XP_006718006.1
XM_011540058.2		Intron			XP_011538360.1
XM_017016509.1		Intron			XP_016871998.1
XM_017016510.1		Intron			XP_016871999.1
XM_017016511.1		Intron			XP_016872000.1
XM_017016512.1		Intron			XP_016872001.1

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