Product Details

SNP ID

rs476851

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.18:8707324 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

AGTGTGGCCCGGGTTGAGGAGCAAC[A/G]GTGTTGCGCGGGCCAGTCCTTTGTA

Phenotype

MIM: 616131 MIM: 615766

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

GACAT2 PubMed Links

Additional Information

For this assay, SNP(s) [rs78564115] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

GACAT2

Gene Name

gastric cancer associated transcript 2 (non-protein coding)

There are no transcripts associated with this gene.

Gene

MTCL1

Gene Name

microtubule crosslinking factor 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_015210.3		Intron			NP_056025.2
XM_005258098.3		Intron			XP_005258155.1
XM_005258099.4		Intron			XP_005258156.1
XM_011525640.2		Intron			XP_011523942.1
XM_011525641.2		Intron			XP_011523943.1
XM_017025671.1		Intron			XP_016881160.1
XM_017025672.1		Intron			XP_016881161.1
XM_017025673.1		Intron			XP_016881162.1
XM_017025674.1		Intron			XP_016881163.1
XM_017025675.1		Intron			XP_016881164.1

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