Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol: shot
Entrez Gene ID: 36542
Gene Name: short stop
Gene Aliases: 42/4, CG18076, CG18637, Dmel\CG18076, Dmel_CG18076, Grv, Kak, Shot, Su(Mir)1, grv, kak, kakp, kop, l(2)CA4, l(2)k03010, l(2)k04204, l(2)k05434, l(2)k05821, l(2)k10821, l(2)k15606, shortstop/kakapo
Chromosome Location: Chr.2R: 13864237 - 13942110 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0013733

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001144185.2	NP_001137657.1	26 - 27	15964	94
	NM_001144186.2	NP_001137658.1	27 - 28	16009	94
	NM_001144188.2	NP_001137660.1	26 - 27	16187	94
	NM_001144189.2	NP_001137661.1	27 - 28	16232	94
	NM_001169677.1	NP_001163148.1	28 - 29	16069	94
	NM_001169678.1	NP_001163149.1	28 - 29	16292	94
	NM_001169679.2	NP_001163150.1	25 - 26	16085	94
	NM_001259378.1	NP_001246307.1	24 - 25	16013	94
	NM_001259379.1	NP_001246308.1	25 - 26	16085	94
	NM_001259380.1	NP_001246309.1	29 - 30	16087	94
	NM_001259381.1	NP_001246310.1	29 - 30	16129	94
	NM_001259382.1	NP_001246311.1	17 - 18	11945	94
	NM_001259383.1	NP_001246312.1	25 - 26	16097	94
	NM_001259384.1	NP_001246313.1	24 - 25	16013	94
	NM_079009.3	NP_523733.2	27 - 28	16232	94
	NM_166016.2	NP_725336.1	27 - 28	16009	94
	NM_166017.2	NP_725337.1	23 - 24	15332	94
	NM_166018.3	NP_725338.1	20 - 21	15125	94
	NM_166019.3	NP_725339.1	24 - 25	26060	94