Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: shi
Entrez Gene ID: 45928
Gene Name: shibire
Gene Aliases: CG18102, DNM3, DYN, Ddyn, Ddyn3, Ddyn4, Dmel\CG18102, Dmel_CG18102, Dyn, Shi, Shibire, Vps1, anon-WO0153538.12, anon-WO0153538.13, anon-WO0153538.14, dDyn, dyn, dynamin, l(1)VII, l(1)shi, shibere, shu
Chromosome Location: Chr.X: 15892116 - 15906716 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0003392

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001042813.2	NP_001036278.1	13 - 14	2887	79
	NM_001042814.2	NP_001036279.1	13 - 14	2899	79
	NM_001169295.1	NP_001162766.1	13 - 14	2758	79
	NM_001169296.1	NP_001162767.1	12 - 13	2474	79
	NM_001169297.2	NP_001162768.1	13 - 14	2776	79
	NM_001272659.2	NP_001259588.1	14 - 15	2626	79
	NM_001272660.2	NP_001259589.1	14 - 15	2747	79
	NM_001298377.1	NP_001285306.1	14 - 15	2581	79
	NM_080114.4	NP_524853.2	12 - 13	2456	79
	NM_167470.3	NP_727910.1	13 - 14	2678	79
	NM_167471.5	NP_727911.1	13 - 14	2758	79
	NM_206742.1	NP_996465.1	13 - 14	2568	79
	NM_206743.2	NP_996466.1	13 - 14	2569	79
	NM_206744.3	NP_996467.1	13 - 14	2569	79
	NM_206745.3	NP_996468.1	13 - 14	2568	79
GenBank mRNA	BT010049.1	-	13 - 14	2735	79
GenBank mRNA	X59435.1	-	-	2474	79