Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
CIITA
Entrez Gene ID
4261
Gene Name
class II, major histocompatibility complex, transactivator
Gene Aliases
C2TA, CIITAIV, MHC2TA, NLRA
Chromosome Location
Chr.16: 10866208 - 10941562 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_000246.3 NP_000237.2 3 - 4 430 63
NM_001286402.1 NP_001273331.1 3 - 4 430 63
NM_001286403.1 NP_001273332.1 3 - 4 430 63
NR_104444.1 3 - 4 430 63
XM_006720880.3 XP_006720943.2 3 - 4 608 63
XM_011522484.2 XP_011520786.1 3 - 4 608 63
XM_011522485.2 XP_011520787.1 3 - 4 608 63
XM_011522486.2 XP_011520788.1 3 - 4 610 63
XM_011522487.2 XP_011520789.1 3 - 4 492 63
XM_011522488.2 XP_011520790.1 3 - 4 1839 63
XM_011522489.2 XP_011520791.1 3 - 4 492 63
XM_011522490.2 XP_011520792.1 3 - 4 1840 63
XM_011522491.2 XP_011520793.1 3 - 4 610 63
XM_011522492.2 XP_011520794.1 3 - 4 556 63
XM_011522493.2 XP_011520795.1 3 - 4 556 63
XM_011522494.2 XP_011520796.1 3 - 4 320 63
XM_011522495.2 XP_011520797.1 3 - 4 558 63
XM_011522496.2 XP_011520798.1 3 - 4 558 63
GenBank mRNA AF410154.1 - 3 - 4 435 63
AY084054.1 - 3 - 4 420 63
AY084055.1 - 3 - 4 420 63
AY699071.1 - 2 - 3 225 63
U18259.1 - 3 - 4 435 63
U18288.1 - 3 - 4 412 63
U31931.1 - 3 - 4 297 63
X74301.1 - 3 - 4 412 63

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