Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
POGK
Entrez Gene ID
57645
Gene Name
pogo transposable element with KRAB domain
Gene Aliases
BASS2, KRBOX2, LST003
Chromosome Location
Chr.1: 166839404 - 166856344 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001314014.1 NP_001300943.1 4 - 4 2970 98
NM_017542.4 NP_060012.3 6 - 6 3196 98
XM_005245370.3 XP_005245427.1 6 - 6 3317 98
XM_011509814.2 XP_011508116.1 6 - 6 3473 98
XM_011509815.1 XP_011508117.1 7 - 7 3074 98
XM_017001914.1 XP_016857403.1 5 - 5 5351 98
XM_017001915.1 XP_016857404.1 4 - 4 2858 98
GenBank mRNA AB040946.1 - 6 - 6 3113 98
AF111706.1 - 2 - 2 1721 98
AF131746.1 - 1 - 1 551 99
AF139898.1 - 1 - 1 490 98
AK027079.1 - 2 - 2 1383 98
AK056711.1 - 6 - 6 3094 98
AK093951.1 - 1 - 1 1964 99

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