Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
MAP2K6
Entrez Gene ID
5608
Gene Name
mitogen-activated protein kinase kinase 6
Gene Aliases
MAPKK6, MEK6, MKK6, PRKMK6, SAPKK-3, SAPKK3
Chromosome Location
Chr.17: 69414697 - 69553854 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq XM_005257515.2 XP_005257572.1 12 - 12 12022 83
XM_005257516.2 XP_005257573.1 12 - 12 11895 83
XM_006721975.3 XP_006722038.1 12 - 12 11923 83
XM_011525025.2 XP_011523327.1 12 - 12 12309 83
XM_011525026.2 XP_011523328.1 12 - 12 11770 83
XM_011525027.2 XP_011523329.1 12 - 12 11685 83


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AW516870.1 - 1 251 Chr. 17 - 69552168 - 69552671 [+] on Build GRCh38 83
GenBankmRNA BI918782.1 - 1 399 Chr. 17 - 69552044 - 69552846 [+] on Build GRCh38 83
GenBankmRNA BC037328.1 - 1 1061 Chr. 17 - 69551358 - 69553861 [+] on Build GRCh38 83
GenBankmRNA BF694748.1 - 420 Chr. - - [-] on Build 83
GenBankmRNA BM811540.1 - 1 183 Chr. 17 - 69552244 - 69553130 [+] on Build GRCh38 83
GenBankmRNA AW956269.1 - 1 359 Chr. 17 - 69552060 - 69552621 [+] on Build GRCh38 83
GenBankmRNA DA893572.1 - 1 49 Chr. 17 - 69552370 - 69552891 [+] on Build GRCh38 83


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream ATP binding cassette subfamily A member 5 ABCA5 ABC13, EST90625 -214.5kb Anti-sense Chr. - 69244435 - 69327182 on Build GRCh38
Downstream long intergenic non-protein coding RNA 1483 LINC01483 40.1kb Sense Chr. - 69593987 - 69903000 on Build GRCh38

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