Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
HDAC9
Entrez Gene ID
9734
Gene Name
histone deacetylase 9
Gene Aliases
HD7, HD7b, HD9, HDAC, HDAC7, HDAC7B, HDAC9B, HDAC9FL, HDRP, MITR
Chromosome Location
Chr.7: 18086942 - 19003745 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001321868.1 NP_001308797.1 20 - 21 2881 121
NM_001321877.1 NP_001308806.1 19 - 20 2811 121
NM_001321897.1 NP_001308826.1 20 - 21 2708 121
NM_058176.2 NP_478056.1 19 - 20 2620 121
NM_178423.2 NP_848510.1 20 - 21 2765 121
NM_178425.3 NP_848512.1 19 - 20 2629 121
XM_011515629.2 XP_011513931.1 20 - 21 2723 121
XM_011515631.2 XP_011513933.1 21 - 22 3037 121
XM_011515634.2 XP_011513936.1 19 - 20 2591 121
XM_011515635.2 XP_011513937.1 21 - 22 3589 121
XM_011515636.2 XP_011513938.1 20 - 21 3310 121
XM_011515637.2 XP_011513939.1 20 - 21 2734 121
XM_011515638.2 XP_011513940.1 20 - 21 3304 121
XM_011515639.2 XP_011513941.1 20 - 21 3501 121
XM_011515641.2 XP_011513943.1 21 - 22 3586 121
XM_011515642.2 XP_011513944.1 19 - 20 4315 121
XM_011515644.2 XP_011513946.1 21 - 22 3561 121
XM_011515645.2 XP_011513947.1 19 - 20 4300 121
XM_011515646.2 XP_011513948.1 19 - 20 4291 121
XM_011515648.2 XP_011513950.1 20 - 21 3319 121
XM_011515649.2 XP_011513951.1 20 - 21 3523 121
XM_017012826.1 XP_016868315.1 20 - 21 3295 121
XM_017012827.1 XP_016868316.1 21 - 22 3378 121
XM_017012828.1 XP_016868317.1 19 - 20 3371 121
GenBank mRNA AJ459808.1 - 20 - 21 2729 121
AK095820.1 - 4 - 5 560 121
AY032737.1 - 19 - 20 2579 121
AY197371.1 - 19 - 20 2588 121
BC111735.1 - 18 - 19 2455 121

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