Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
CIITA
Entrez Gene ID
4261
Gene Name
class II, major histocompatibility complex, transactivator
Gene Aliases
C2TA, CIITAIV, MHC2TA, NLRA
Chromosome Location
Chr.16: 10866208 - 10941562 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_000246.3 NP_000237.2 6 - 7 619 134
NM_001286402.1 NP_001273331.1 6 - 7 622 134
NR_104444.1 6 - 7 619 134
XM_006720880.3 XP_006720943.2 6 - 7 800 134
XM_011522484.2 XP_011520786.1 6 - 7 800 134
XM_011522485.2 XP_011520787.1 6 - 7 800 134
XM_011522486.2 XP_011520788.1 6 - 7 802 134
XM_011522488.2 XP_011520790.1 6 - 7 2031 134
XM_011522490.2 XP_011520792.1 6 - 7 2029 134
XM_011522491.2 XP_011520793.1 6 - 7 802 134
XM_011522492.2 XP_011520794.1 6 - 7 748 134
XM_011522493.2 XP_011520795.1 6 - 7 745 134
XM_011522494.2 XP_011520796.1 6 - 7 512 134
GenBank mRNA AF410154.1 - 6 - 7 624 134
AY084055.1 - 6 - 7 609 134
AY699071.1 - 5 - 6 417 134
U18259.1 - 6 - 7 624 134
U31931.1 - 6 - 7 486 134
X74301.1 - 6 - 7 601 134

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