Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
ZNF43
Entrez Gene ID
7594
Gene Name
zinc finger protein 43
Gene Aliases
HTF6, KOX27, ZNF39L1
Chromosome Location
Chr.19: 21804946 - 21852095 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq XM_017027207.1 XP_016882696.1 4 - 4 2908 106
XM_017027209.1 XP_016882698.1 4 - 4 2641 106
XM_017027210.1 XP_016882699.1 3 - 3 2432 106
XM_017027211.1 XP_016882700.1 4 - 4 2575 106
XM_017027213.1 XP_016882702.1 4 - 4 2683 106


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DN993158.1 - 1 342 Chr. 19 - 21840844 - 21841443 [-] on Build GRCh38 106
GenBankmRNA AK097763.1 - 1 538 Chr. 19 - 21839597 - 21841647 [-] on Build GRCh38 106
GenBankmRNA BE066012.1 - 1 Chr. 19 - 21841034 - 21841468 [+] on Build GRCh38 106
GenBankmRNA BU187775.1 - 1 293 Chr. 19 - 21840536 - 21841402 [-] on Build GRCh38 106


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream zinc finger protein 100 ZNF100 -70.2kb Sense Chr. - 21724041 - 21767628 on Build GRCh38
Downstream zinc finger protein 208 ZNF208 PMIDP, ZNF95 122.8kb Sense Chr. - 21966095 - 22010990 on Build GRCh38

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