Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
CASC8
Entrez Gene ID
727677
Gene Name
cancer susceptibility candidate 8 (non-protein coding)
Gene Aliases
CARLo-1, LINC00860
Chromosome Location
Chr.8: 127289676 - 127482139 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_024393.1 1 - 2 503 65
NR_117100.1 1 - 2 503 65
GenBank mRNA DQ515896.1 - 1 - 2 503 65
DQ515897.1 - 1 - 2 503 65


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AW183883.1 - 1 - 2 Chr. 8 - 127480908 - 127481839 [+] on Build GRCh38 65


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream POU class 5 homeobox 1B POU5F1B OCT4-PG1, OCT4PG1, OTF3C, OTF3P1, POU5F1P1, POU5F1P4, POU5FLC20, POU5FLC8 -63.5kb Anti-sense Chr. - 127415612 - 127417210 on Build GRCh38
Downstream cancer susceptibility candidate 11 (non-protein coding) CASC11 CARLo-7, LINC00990, TCONS_00014535 218.5kb Sense Chr. - 127700608 - 127733967 on Build GRCh38

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