Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: KIF1C
Entrez Gene ID: 10749
Gene Name: kinesin family member 1C
Gene Aliases: LTXS1, SATX2, SAX2, SPAX2, SPG58
Chromosome Location: Chr.17: 4997948 - 5028399 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_006612.5	NP_006603.2	23 - 23	7679	99
GenBank mRNA	BC040307.1	-	1 - 1	2049	99

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AW972479.1	-	1			Chr. 17 - 5027855 - 5028398 [-] on Build GRCh38	99
GenBankmRNA	DB318138.1	-	1			Chr. 17 - 5027858 - 5028400 [-] on Build GRCh38	99
GenBankmRNA	BG152620.1	-	1			Chr. 17 - 5028065 - 5028401 [-] on Build GRCh38	99
GenBankmRNA	AI419468.1	-	1			Chr. 17 - 5027998 - 5028398 [-] on Build GRCh38	99
GenBankmRNA	AA505320.1	-	1			Chr. 17 - 5027976 - 5028401 [-] on Build GRCh38	99
GenBankmRNA	CN430098.1	-	1	506		Chr. 17 - 5027656 - 5028352 [+] on Build GRCh38	99
GenBankmRNA	AI471102.1	-	1			Chr. 17 - 5028064 - 5028394 [-] on Build GRCh38	99
GenBankmRNA	AI073641.1	-	1			Chr. 17 - 5028017 - 5028401 [-] on Build GRCh38	99

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	uncharacterized LOC102724009	LOC102724009		-6.0kb	Anti-sense	Chr. - 5019214 - 5020093 on Build GRCh38
Downstream	solute carrier family 52 member 1	SLC52A1	GPCR42, GPR172B, PAR2, RBFVD, RFT1, RFVT1, hRFT1	4.2kb	Anti-sense	Chr. - 5032602 - 5035458 on Build GRCh38

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