Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- SNORD21
- Entrez Gene ID
-
6083
- Gene Name
- small nucleolar RNA, C/D box 21
- Gene Aliases
-
RNU21, U21
- Chromosome Location
-
Chr.1: 92837289 - 92837383 on Build GRCh38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| RefSeq |
NR_000006.8 |
|
1 - 1 |
47 |
77 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
CN276670.1 |
- |
1 |
184 |
|
Chr. 1 - 92837160 - 92837745 [+] on Build GRCh38 |
77 |
| GenBankmRNA |
BX357719.2 |
- |
3 |
|
|
Chr. 1 - 92836905 - 92841862 [-] on Build GRCh38 |
77 |
| GenBankmRNA |
CX788805.1 |
- |
1 |
629 |
|
Chr. 1 - 92836711 - 92837494 [+] on Build GRCh38 |
77 |
| GenBankmRNA |
BX357720.2 |
- |
1 |
432 |
|
Chr. 1 - 92836904 - 92841906 [+] on Build GRCh38 |
77 |
| GenBankmRNA |
DW408893.1 |
- |
1 |
63 |
|
Chr. 1 - 92837289 - 92837613 [+] on Build GRCh38 |
77 |
| GenBankmRNA |
CA447946.1 |
- |
4 |
|
|
Chr. 1 - 92837118 - 92841921 [-] on Build GRCh38 |
77 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
family with sequence similarity 69 member A |
FAM69A |
|
|
Anti-sense |
Chr. - 92832729 - 92961522 on Build GRCh38 |
| Downstream |
small nucleolar RNA, H/ACA box 66 |
SNORA66 |
RNU66, U66 |
3.3kb
|
Sense |
Chr. - 92840719 - 92840851 on Build GRCh38 |
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