Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
Arxes1
Entrez Gene ID
76219
Gene Name
adipocyte-related X-chromosome expressed sequence 1
Gene Aliases
6530401D17Rik, Spc22/23, Spcs3
Chromosome Location
Chr.X: 136033367 - 136034946 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_029541.3 NP_083817.1 1 - 1 1476 126
GenBank mRNA AK018307.1 - 1 - 1 1475 126
BC016270.1 - 1 - 1 1455 126


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA CJ294638.1 - 1 411 Chr. X - 136034438 - 136034942 [+] on Build GRCm38 126
GenBankmRNA AI839310.1 - 2 Chr. X - 136034542 - 136038447 [-] on Build GRCm38 125
GenBankmRNA BU700875.1 - 1 Chr. X - 136034427 - 136034943 [-] on Build GRCm38 126
GenBankmRNA CJ237971.1 - 1 374 Chr. X - 136034469 - 136034940 [+] on Build GRCm38 126
GenBankmRNA BB041721.2 - 1 579 Chr. X - 136034266 - 136034925 [+] on Build GRCm38 126


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream adipocyte-related X-chromosome expressed sequence 2 Arxes2 2900062L11Rik, Spc22/23, Spcs3 -38.0kb Sense Chr. - 135993820 - 135995359 on Build GRCm38
Downstream brain expressed X-linked 2 Bex2 AL024066, Bex1 31.6kb Anti-sense Chr. - 136066565 - 136068236 on Build GRCm38

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