Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- Jpx
- Entrez Gene ID
-
70252
- Gene Name
- Jpx transcript, Xist activator (non-protein coding)
- Gene Aliases
-
2010000I03Rik, 2510040I06Rik, Enox
- Chromosome Location
-
Chr.X: 103493576 - 103506425 on Build GRCm38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| GenBank mRNA |
AK007997.1 |
- |
1 - 1 |
648 |
103 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
BY603197.1 |
- |
1 |
216 |
|
Chr. X - 103494009 - 103494390 [+] on Build GRCm38 |
103 |
| GenBankmRNA |
AV061747.1 |
- |
1 |
399 |
|
Chr. X - 103493825 - 103494314 [+] on Build GRCm38 |
103 |
| GenBankmRNA |
AJ421479.1 |
- |
|
|
|
Chr. - - [-] on Build |
103 |
| GenBankmRNA |
BY707994.1 |
- |
1 |
645 |
|
Chr. X - 103493580 - 103494316 [+] on Build GRCm38 |
103 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
X (inactive)-specific transcript, opposite strand |
Tsix |
|
-8.6kb
|
Sense |
Chr. - 103431517 - 103484957 on Build GRCm38 |
| Downstream |
polycomb group ring finger 6 pseudogene |
Gm9785 |
ENSMUSG00000043661 |
31.0kb
|
Anti-sense |
Chr. - 103525319 - 103525847 on Build GRCm38 |
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