Product Details
- SNP ID
-
rs149479181
- Assay Type
- Functionally Tested
- NCBI dbSNP Submissions
-
NA
- Location
-
Chr.2:88174817 on Build GRCh38
- Set Membership
-
- Context Sequence [VIC/FAM]
- ACTTCCTGGAGAAGAGGGAGAAGCA[C/T]GTCACTGTGGTTGTAGGTGTGTTTT
- Phenotype
-
MIM: 611261
- Polymorphism
- C/T, Transition Substitution
- Allele Nomenclature
-
- Literature Links
-
THNSL2
PubMed Links
- Additional Information
-
For this assay, SNP(s) [rs2139100] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Gene Details
- Gene
- THNSL2
- Gene Name
- threonine synthase like 2
| Transcript Accession |
SNP Location |
SNP Type |
Codon Change |
Amino Acid Change |
Protein ID |
| NM_001244676.1 |
2315 |
Silent Mutation |
CAC,CAT |
H134H |
NP_001231605.1 |
| NM_001244678.1 |
2315 |
Intron |
|
|
NP_001231607.1 |
| NM_018271.4 |
2315 |
Silent Mutation |
CAC,CAT |
H134H |
NP_060741.3 |
| XM_005264400.4 |
2315 |
Silent Mutation |
CAC,CAT |
H134H |
XP_005264457.1 |
| XM_005264401.4 |
2315 |
Silent Mutation |
CAC,CAT |
H134H |
XP_005264458.1 |
| XM_005264402.3 |
2315 |
Silent Mutation |
CAC,CAT |
H134H |
XP_005264459.1 |
| XM_005264403.4 |
2315 |
Silent Mutation |
CAC,CAT |
H134H |
XP_005264460.1 |
| XM_005264405.4 |
2315 |
Silent Mutation |
CAC,CAT |
H134H |
XP_005264462.1 |
| XM_006712041.3 |
2315 |
Silent Mutation |
CAC,CAT |
H134H |
XP_006712104.1 |
| XM_006712042.3 |
2315 |
Silent Mutation |
CAC,CAT |
H134H |
XP_006712105.1 |
| XM_006712043.2 |
2315 |
Silent Mutation |
CAC,CAT |
H134H |
XP_006712106.1 |
| XM_006712044.3 |
2315 |
Silent Mutation |
CAC,CAT |
H134H |
XP_006712107.1 |
| XM_011532953.2 |
2315 |
Silent Mutation |
CAC,CAT |
H134H |
XP_011531255.1 |
| XM_011532954.2 |
2315 |
Intron |
|
|
XP_011531256.1 |
| XM_011532955.2 |
2315 |
UTR 5 |
|
|
XP_011531257.1 |
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