Product Details

SNP ID

rs142708582

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.11:772492 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TCGTTGGTGGCACAGCACAGGGCGG[C/T]GACACCGTGGCCGACGGCGCAGATG

Phenotype

MIM: 602063

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

LOC171391 PubMed Links

Additional Information

For this assay, SNP(s) [rs12224894] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LOC171391

Gene Name

uncharacterized LOC171391

There are no transcripts associated with this gene.

Gene

PDDC1

Gene Name

Parkinson disease 7 domain containing 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001318818.1	410	Missense Mutation	ACC,GCC	T79A	NP_001305747.1
NM_001318820.1	410	Missense Mutation	ACC,GCC	T93A	NP_001305749.1
NM_001318821.1	410	Missense Mutation	ACC,GCC	T129A	NP_001305750.1
NM_001318822.1	410	Missense Mutation	ACC,GCC	T43A	NP_001305751.1
NM_001318823.1	410	Missense Mutation	ACC,GCC	T79A	NP_001305752.1
NM_001318824.1	410	Missense Mutation	ACC,GCC	T93A	NP_001305753.1
NM_182612.3	410	Missense Mutation	ACC,GCC	T129A	NP_872418.1
XM_005252898.2	410	Missense Mutation	ACC,GCC	T129A	XP_005252955.1
XM_011520064.1	410	Missense Mutation	ACC,GCC	T129A	XP_011518366.1
XM_017017660.1	410	Missense Mutation	ACC,GCC	T129A	XP_016873149.1
XM_017017661.1	410	Missense Mutation	ACC,GCC	T129A	XP_016873150.1
XM_017017662.1	410	Missense Mutation	ACC,GCC	T129A	XP_016873151.1
XM_017017663.1	410	Missense Mutation	ACC,GCC	T93A	XP_016873152.1
XM_017017664.1	410	Missense Mutation	ACC,GCC	T129A	XP_016873153.1
XM_017017665.1	410	Missense Mutation	ACC,GCC	T129A	XP_016873154.1
XM_017017666.1	410	Missense Mutation	ACC,GCC	T79A	XP_016873155.1
XM_017017667.1	410	Missense Mutation	ACC,GCC	T93A	XP_016873156.1
XM_017017668.1	410	Missense Mutation	ACC,GCC	T79A	XP_016873157.1

Gene

TALDO1

Gene Name

transaldolase 1

There are no transcripts associated with this gene.

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