Product Details

SNP ID

rs3815138

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.12:47784682 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

CCTGGGAGGTGGGACGAACACAACA[C/T]GGGAGAACTGACCATCACCACGGCC

Phenotype

MIM: 606542 MIM: 612187

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

HDAC7 PubMed Links

Additional Information

For this assay, SNP(s) [rs144355039] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

HDAC7

Gene Name

histone deacetylase 7

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001098416.3		Intron			NP_001091886.1
NM_001308090.1		Intron			NP_001295019.1
NM_015401.4		Intron			NP_056216.2
XM_011538478.1		Intron			XP_011536780.1
XM_011538479.1		Intron			XP_011536781.1
XM_011538480.1		Intron			XP_011536782.1
XM_011538481.1		Intron			XP_011536783.1
XM_011538482.1		Intron			XP_011536784.1
XM_011538483.1		Intron			XP_011536785.1
XM_017019455.1		Intron			XP_016874944.1
XM_017019456.1		Intron			XP_016874945.1

Gene

SLC48A1

Gene Name

solute carrier family 48 member 1

There are no transcripts associated with this gene.

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