Product Details

SNP ID

rs55797273

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.17:3923928 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

ACCAAACAGCAGGTCAGCAGGTGGG[C/T]ACAGGGCCCGCTCCTGCTAAGACCT

Phenotype

MIM: 601929 MIM: 600845

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

ATP2A3 PubMed Links

Additional Information

For this assay, SNP(s) [rs115103437] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

ATP2A3

Gene Name

ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_005173.3	4813	UTR 3			NP_005164.2
NM_174953.2	4813	UTR 3			NP_777613.1
NM_174954.2	4813	UTR 3			NP_777614.1
NM_174955.2	4813	UTR 3			NP_777615.1
NM_174956.2	4813	UTR 3			NP_777616.1
NM_174957.2	4813	UTR 3			NP_777617.1
NM_174958.2	4813	UTR 3			NP_777618.1
XM_011523881.2	4813	Intron			XP_011522183.1
XM_011523882.2	4813	Intron			XP_011522184.1
XM_011523884.2	4813	Intron			XP_011522186.1
XM_011523885.1	4813	UTR 3			XP_011522187.1
XM_011523888.2	4813	UTR 3			XP_011522190.1
XM_011523889.1	4813	Intron			XP_011522191.1
XM_011523892.2	4813	Intron			XP_011522194.1
XM_017024692.1	4813	Intron			XP_016880181.1
XM_017024693.1	4813	Intron			XP_016880182.1

Gene

P2RX1

Gene Name

purinergic receptor P2X 1

There are no transcripts associated with this gene.

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