Product Details

Assay Reference Genome
Location

Chr.17:46031496 on build GRCh38
Cytoband
17q21.31
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

Target Gene Details

Entrez Gene ID
284058
Gene Symbol
KANSL1
Gene Name
KAT8 regulatory NSL complex subunit 1
Gene Aliases
CENP-36, KDVS, KIAA1267, MSL1v1, NSL1, hMSL1v1
Location
Chr.17:46029916-46225374 on build GRCh38
Assay Gene Location
Within Exon 20
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
KANSL1 NM_001193465.1 16 3552 NP_001180394.1
NM_001193466.1 15 3769 NP_001180395.1
NM_015443.3 15 3471 NP_056258.1
XM_006721823.1 16 3555 XP_006721886.1
XM_006721824.3 16 3739 XP_006721887.1
XM_011524628.2 16 3736 XP_011522930.1
XM_011524629.2 15 3637 XP_011522931.1
XM_011524630.2 15 3550 XP_011522932.1
XM_011524631.2 15 3548 XP_011522933.1
XM_011524632.2 15 2165 XP_011522934.1
XM_017024488.1 XP_016879977.1
AB033093.1 14 3392 BAA86581.1
AK094946.1 7 1270
AK291259.1 15 3529
AK310569.1 1 1071
AL117476.1 4 639 CAB55949.1
AL137317.1 11 1713 CAB70694.1
BC035892.1 10 1576 AAH35892.1
BC098376.1 15 3471 AAH98376.1
BX538006.1 15 3772 CAD97958.1
BX648760.1 8 7529 CAH10565.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv471698 Chr17:46002113 - 46300887 on Build GRCh38 Gain+Loss MAPT LRRC37A KANSL1-AS1 ARL17B KANSL1
nsv469705 Chr17:45969304 - 46127121 on Build GRCh38 Loss MAPT STH KANSL1
nsv469537 Chr17:46002112 - 46163353 on Build GRCh38 Gain+Loss MAPT KANSL1
nsv575142 Chr17:46003698 - 46172742 on Build GRCh38 Loss MAPT KANSL1
esv2762433 Chr17:45496768 - 46710828 on Build GRCh38 Gain+Loss MAPT NSFP1 LOC644172 LOC107987253 LRRC37A4P SPPL2C STH MAPT-AS1 KANSL1-AS1 KANSL1 NSF LOC105376839 CRHR1 LRRC37A MGC57346-CRHR1 MAPT-IT1 ARL17A MGC57346 LOC107987254 ARL17B CRHR1-IT1 LRRC37A2
nsv1072740 Chr17:45970433 - 46248034 on Build GRCh38 Deletion MAPT STH KANSL1-AS1 KANSL1
dgv3178n100 Chr17:45877004 - 46034461 on Build GRCh38 Gain MAPT MAPT-IT1 STH MAPT-AS1 KANSL1
esv2751686 Chr17:45962198 - 46286690 on Build GRCh38 Gain MAPT LRRC37A STH KANSL1-AS1 ARL17B KANSL1
esv2758692 Chr17:46006548 - 47199967 on Build GRCh38 Gain+Loss MAPT RPS2P47 MIR5089 NSFP1 LOC107987253 KANSL1-AS1 KANSL1 NSF LRRC37A WNT9B WNT3 ARL17A RPRML GOSR2 LOC107987254 ARL17B LRRC37A2 CDC27
dgv128e55 Chr17:46017105 - 46286690 on Build GRCh38 Gain MAPT LRRC37A KANSL1-AS1 ARL17B KANSL1
dgv127e55 Chr17:45927606 - 46733750 on Build GRCh38 Gain MAPT LRRC37A NSFP1 LOC107987253 ARL17A STH KANSL1-AS1 LOC107987254 ARL17B LRRC37A2 KANSL1 NSF

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