Assay Design
The assay probe spans an exon junction.
Gene Transcripts
- Gene Symbol
- PQLC2L
- Entrez Gene ID
-
152078
- Gene Name
- PQ loop repeat containing 2 like
- Gene Aliases
-
C3orf55
- Chromosome Location
-
Chr.3: 157543344 - 157601233 on Build GRCh38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| RefSeq |
NR_024016.2 |
|
2 - 3 |
274 |
134 |
| GenBank mRNA |
BE905784.1 |
- |
2 - 3 |
274 |
134 |
| BX113701.1 |
- |
2 - 3 |
245 |
134 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
BM716256.1 |
- |
2 - 3 |
233 |
|
Chr. 3 - 157543385 - 157569529 [+] on Build GRCh38 |
134 |
| GenBankmRNA |
AI348631.1 |
- |
2 - 3 |
230 |
|
Chr. 3 - 157543388 - 157569486 [+] on Build GRCh38 |
134 |
| GenBankmRNA |
BM709511.1 |
- |
2 - 3 |
233 |
|
Chr. 3 - 157543385 - 157569663 [+] on Build GRCh38 |
134 |
| GenBankmRNA |
BG216078.1 |
- |
1 - 2 |
|
|
Chr. 3 - 157553230 - 157569891 [-] on Build GRCh38 |
134 |
| GenBankmRNA |
BG194964.1 |
- |
1 - 2 |
|
|
Chr. 3 - 157553230 - 157569890 [-] on Build GRCh38 |
134 |
| GenBankmRNA |
BG197365.1 |
- |
|
108 |
|
Chr. - - [-] on Build |
134 |
| GenBankmRNA |
BG200482.1 |
- |
1 - 2 |
108 |
|
Chr. 3 - 157553230 - 157569865 [+] on Build GRCh38 |
134 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
ventricular zone expressed PH domain containing 1 |
VEPH1 |
MELT, VEPH |
-49.6kb
|
Anti-sense |
Chr. - 157259742 - 157503626 on Build GRCh38 |
| Downstream |
short stature homeobox 2 |
SHOX2 |
OG12, OG12X, SHOT |
526.3kb
|
Anti-sense |
Chr. - 158096011 - 158106212 on Build GRCh38 |
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