Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
C9orf3
Entrez Gene ID
84909
Gene Name
chromosome 9 open reading frame 3
Gene Aliases
AOPEP, AP-O, APO, C90RF3, ONPEP
Chromosome Location
Chr.9: 94726604 - 95148264 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq XM_011519130.1 XP_011517432.1 6 - 6 2015 82
GenBank mRNA BC042892.1 - 1 - 1 2654 82


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AW469589.1 - 1 Chr. 9 - 94874863 - 94875323 [-] on Build GRCh38 82
GenBankmRNA BE505030.1 - 1 Chr. 9 - 94874792 - 94875320 [-] on Build GRCh38 82


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream microRNA 2278 MIR2278 mir-2278 -62.3kb Sense Chr. - 94809962 - 94810057 on Build GRCh38
Downstream uncharacterized LOC101928119 LOC101928119 45.0kb Anti-sense Chr. - 94920339 - 94937841 on Build GRCh38

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