Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- LMF1
- Entrez Gene ID
-
64788
- Gene Name
- lipase maturation factor 1
- Gene Aliases
-
C16orf26, HMFN1876, JFP11, TMEM112, TMEM112A
- Chromosome Location
-
Chr.16: 853632 - 981615 on Build GRCh38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| RefSeq |
NR_036442.1 |
|
4 - 4 |
981 |
96 |
| GenBank mRNA |
BC036550.1 |
- |
2 - 2 |
2954 |
96 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
AL566545.3 |
- |
1 |
|
|
Chr. 16 - 975842 - 976818 [+] on Build GRCh38 |
96 |
| GenBankmRNA |
BF527399.1 |
- |
|
|
|
Chr. - - [-] on Build |
95 |
| GenBankmRNA |
AI084161.1 |
- |
1 |
|
|
Chr. 16 - 976410 - 976836 [+] on Build GRCh38 |
96 |
| GenBankmRNA |
CF455188.1 |
- |
1 |
340 |
|
Chr. 16 - 976061 - 976842 [-] on Build GRCh38 |
96 |
| GenBankmRNA |
BX423449.2 |
- |
1 |
|
|
Chr. 16 - 975794 - 976750 [+] on Build GRCh38 |
96 |
| GenBankmRNA |
BI756297.1 |
- |
1 |
444 |
|
Chr. 16 - 976050 - 976974 [-] on Build GRCh38 |
96 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
LMF1 antisense RNA 1 |
LMF1-AS1 |
LA16c-366D3.1 |
-41.2kb
|
Anti-sense |
Chr. - 921033 - 934524 on Build GRCh38 |
| Downstream |
SRY-box 8 |
SOX8 |
|
4.8kb
|
Anti-sense |
Chr. - 981808 - 986979 on Build GRCh38 |
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