Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: NBPF11
Entrez Gene ID: 200030
Gene Name: neuroblastoma breakpoint family member 11
Gene Aliases: NBPF24
Chromosome Location: Chr.1: 148102046 - 148152190 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001101663.4	NP_001095133.3	18 - 19	2574	108
	NM_183372.5	NP_899228.4	20 - 21	3268	108
	NR_046188.3		21 - 22	3336	108
	NR_110864.1		19 - 20	3260	108
GenBank mRNA	AF419617.1	-	19 - 20	2687	108
	AK054850.1	-	4 - 5	1013	108
	AK302413.1	-	17 - 18	2410	108
	AL832622.2	-	21 - 22	3471	108
	BC136292.1	-	20 - 21	3268	108
	BX648497.1	-	19 - 20	3059	108

Gene Symbol: NBPF1
Entrez Gene ID: 55672
Gene Name: neuroblastoma breakpoint family member 1
Gene Aliases: AB13, AB14, AB23, AD2, NBG, NBPF
Chromosome Location: Chr.1: 16562427 - 16613605 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
GenBank mRNA	AB051480.1	-	17 - 18	2125	108
	AF379624.1	-	7 - 8	853	108
	BC034418.1	-	12 - 13	1630	108
	BC094705.1	-	10 - 11	1276	108

Gene Symbol: NBPF10
Entrez Gene ID: 100132406
Gene Name: neuroblastoma breakpoint family member 10
Gene Aliases: AB6, AG1, NBPF9
Chromosome Location: Chr.1: 146066318 - 146144804 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001039703.5	NP_001034792.4	-	2284	108
RefSeq	NM_001302371.1	NP_001289300.1	-	2284	108
GenBank mRNA	AF379632.1	-	5 - 6	542	108
	AL050141.1	-	4 - 5	2080	108
	AY894565.1	-	15 - 16	2096	108
	BX538005.1	-	24 - 25	3531	108

Gene Symbol: NBPF12
Entrez Gene ID: 149013
Gene Name: neuroblastoma breakpoint family member 12
Gene Aliases: COAS1, KIAA1245
Chromosome Location: Chr.1: 146938545 - 146996093 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001278141.1	NP_001265070.1	27 - 28	4279	108
GenBank mRNA	AB033071.1	-	27 - 28	3752	108

Gene Symbol: NBPF14
Entrez Gene ID: 25832
Gene Name: neuroblastoma breakpoint family member 14
Gene Aliases: DJ328E19.C1.1, NBPF
Chromosome Location: Chr.1: 148531385 - 148607636 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_015383.2	NP_056198.2	40 - 41	5177	108
RefSeq	XM_011509395.2	XP_011507697.1	43 - 44	5677	108
GenBank mRNA	AF379626.1	-	2 - 3	192	108
	AK095459.1	-	8 - 9	1716	108
	AL117237.1	-	10 - 11	1246	108

Gene Symbol: NBPF15
Entrez Gene ID: 284565
Gene Name: neuroblastoma breakpoint family member 15
Gene Aliases: AB14, AG3, NBPF16
Chromosome Location: Chr.1: 144421386 - 144459464 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001170755.2	NP_001164226.1	18 - 19	2598	108
	NM_173638.4	NP_775909.2	15 - 16	2068	108
	XM_017001077.1	XP_016856566.1	13 - 14	1716	108
GenBank mRNA	AF379630.1	-	10 - 11	1246	108
	AK097180.1	-	18 - 19	2517	108
	AK290142.1	-	7 - 8	770	108
	AK290302.1	-	12 - 13	1527	108
	AK299360.1	-	9 - 10	1108	108
	AY894566.1	-	12 - 13	1508	108
	DA932476.1	-	2 - 3	202	108

Gene Symbol: NBPF19
Entrez Gene ID: 101060226
Gene Name: neuroblastoma breakpoint family member 19
Gene Aliases: -
Chromosome Location: Chr.1: 149472955 - 149556256 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	XM_017003019.1	XP_016858508.1	13 - 14	1709	108
GenBank mRNA	AF379633.1	-	1 - 2	109	108
	AF379636.1	-	5 - 6	641	108
	AK292666.1	-	4 - 5	462	108

Gene Symbol: NBPF26
Entrez Gene ID: 101060684
Gene Name: neuroblastoma breakpoint family member 26
Gene Aliases: -
Chromosome Location: Chr.1: 120805561 - 120842215 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	XM_011542529.2	XP_011540831.1	16 - 17	2279	108
RefSeq	XM_017003011.1	XP_016858500.1	16 - 17	2278	108
GenBank mRNA	AK294944.1	-	19 - 20	2162	108
	DA203219.1	-	3 - 4	272	108
	DA675097.1	-	3 - 4	247	108

Gene Symbol: NBPF8
Entrez Gene ID: 728841
Gene Name: neuroblastoma breakpoint family member 8
Gene Aliases: NBPF8P
Chromosome Location: Chr.1: 120436351 - 120467844 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001037501.2	NP_001032590.2	16 - 17	2421	108
	NR_102404.1		15 - 16	2257	108
	NR_102405.1		14 - 15	2154	108
GenBank mRNA	AY894561.1	-	9 - 10	1221	108
	AY894562.1	-	11 - 12	1446	108
	AY894563.1	-	10 - 11	1320	108
	AY894567.1	-	14 - 15	2154	108
	AY894568.1	-	15 - 16	2052	108
	AY894569.1	-	15 - 16	2054	108
	AY894570.1	-	11 - 12	1446	108
	AY894571.1	-	15 - 16	2318	108
	AY894572.1	-	15 - 16	2257	108
	AY894573.1	-	15 - 16	2318	108
	BC086308.1	-	16 - 17	2264	108

Gene Symbol: NBPF9
Entrez Gene ID: 400818
Gene Name: neuroblastoma breakpoint family member 9
Gene Aliases: AE01
Chromosome Location: Chr.1: 149054033 - 149090861 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001277444.1	NP_001264373.1	21 - 22	2831	108
RefSeq	XM_006711317.2	XP_006711380.1	22 - 23	3059	108
GenBank mRNA	AK294414.1	-	15 - 16	1989	108
GenBank mRNA	DQ786323.1	-	4 - 5	497	108

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