Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
Snhg12
Entrez Gene ID
100039864
Gene Name
small nucleolar RNA host gene 12
Gene Aliases
2310005L22Rik
Chromosome Location
Chr.4: 132308678 - 132311024 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_029468.1 1 - 2 226 96
GenBank mRNA AK009175.1 - 1 - 2 230 96
BY130275.1 - 1 - 2 227 96
CB201672.1 - 1 - 2 211 96


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AW911793.1 - 1 - 2 185 Chr. 4 - 132308719 - 132310443 [+] on Build GRCm38 96
GenBankmRNA BE689861.1 - 1 - 2 186 Chr. 4 - 132308718 - 132310911 [+] on Build GRCm38 96
GenBankmRNA CF616156.1 - 277 Chr. - - [-] on Build 96
GenBankmRNA AA060788.1 - 1 - 2 91 Chr. 4 - 132308813 - 132311023 [+] on Build GRCm38 96
GenBankmRNA AV573991.1 - 1 - 2 155 Chr. 4 - 132308748 - 132310917 [+] on Build GRCm38 96
GenBankmRNA BX523517.1 - 1 - 2 90 Chr. 4 - 132308814 - 132310216 [+] on Build GRCm38 96
GenBankmRNA W18050.1 - 179 Chr. - - [-] on Build 96
GenBankmRNA BY088812.1 - 1 - 2 226 Chr. 4 - 132308678 - 132310203 [+] on Build GRCm38 96
GenBankmRNA W30288.1 - 198 Chr. - - [-] on Build 96
GenBankmRNA AA030367.1 - 1 - 2 199 Chr. 4 - 132308705 - 132310888 [+] on Build GRCm38 96
GenBankmRNA AV511014.1 - 1 - 2 211 Chr. 4 - 132308699 - 132310375 [+] on Build GRCm38 96
GenBankmRNA BY099239.1 - 1 - 2 226 Chr. 4 - 132308678 - 132310216 [+] on Build GRCm38 96
GenBankmRNA BY111987.1 - 1 - 2 226 Chr. 4 - 132308678 - 132310201 [+] on Build GRCm38 96
GenBankmRNA BY113210.1 - 1 - 2 227 Chr. 4 - 132308678 - 132310216 [+] on Build GRCm38 97
GenBankmRNA BG803564.1 - 1 - 2 184 Chr. 4 - 132308720 - 132310492 [+] on Build GRCm38 96
GenBankmRNA BU551930.1 - 1 - 2 131 Chr. 4 - 132308773 - 132310927 [+] on Build GRCm38 96
GenBankmRNA BY333000.1 - 1 - 2 226 Chr. 4 - 132308678 - 132310166 [+] on Build GRCm38 96
GenBankmRNA BY329920.1 - 1 - 2 228 Chr. 4 - 132308678 - 132310174 [+] on Build GRCm38 96
GenBankmRNA AA060945.1 - 1 - 2 224 Chr. 4 - 132308693 - 132310504 [+] on Build GRCm38 96
GenBankmRNA BQ031695.1 - 4 - 5 Chr. 4 - 132308825 - 132311024 [-] on Build GRCm38 96
GenBankmRNA AV583500.1 - 1 - 2 140 Chr. 4 - 132308764 - 132310876 [+] on Build GRCm38 96
GenBankmRNA AA027642.1 - 1 - 2 200 Chr. 4 - 132308704 - 132310891 [+] on Build GRCm38 96
GenBankmRNA EL965250.1 - 1 - 2 192 Chr. 4 - 132308726 - 132310927 [+] on Build GRCm38 96
GenBankmRNA BE200523.1 - 1 - 2 202 Chr. 4 - 132308702 - 132310900 [+] on Build GRCm38 96
GenBankmRNA AW989652.1 - 1 - 2 186 Chr. 4 - 132308718 - 132310895 [+] on Build GRCm38 96
GenBankmRNA AA797534.1 - 1 - 2 131 Chr. 4 - 132308773 - 132310853 [+] on Build GRCm38 96
GenBankmRNA BY125255.1 - 1 - 2 226 Chr. 4 - 132308678 - 132310174 [+] on Build GRCm38 96


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream small nucleolar RNA, H/ACA box 16A Snora16a Sense Chr. - 132309465 - 132309600 on Build GRCm38
Downstream small nucleolar RNA, H/ACA box 44 Snora44 MBI-64 50.0 Sense Chr. - 132309953 - 132310069 on Build GRCm38

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