Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: Cklf
Entrez Gene ID: 75458
Gene Name: chemokine-like factor
Gene Aliases: 1700001C14Rik, 1810018M11Rik, C32, CKLF1, CKLF3, CKLF4, CKLF5, Cklf2, Cklf6, HSPC224, UCK-1
Chromosome Location: Chr.8: 104250861 - 104264936 on Build GRCm38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NR_104433.1		3 - 4	495	86
GenBank mRNA	AF401531.2	-	3 - 4	400	86

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	CN837154.1	-	3 - 4	348		Chr. 8 - 104251009 - 104263411 [+] on Build GRCm38	86
GenBankmRNA	BE851844.1	-	2 - 3			Chr. 8 - 104258552 - 104263444 [-] on Build GRCm38	86
GenBankmRNA	CA466115.1	-	3 - 4	427		Chr. 8 - 104250929 - 104263355 [+] on Build GRCm38	86
GenBankmRNA	BU939278.1	-	3 - 4	467		Chr. 8 - 104250892 - 104263449 [+] on Build GRCm38	86

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	thymidine kinase 2, mitochondrial	Tk2	AU024611, mt-TK	-12.9kb	Anti-sense	Chr. - 104226691 - 104248574 on Build GRCm38
Downstream	CKLF-like MARVEL transmembrane domain containing 2A	Cmtm2a	1700001K04Rik, 1700041N15Rik, 1700063K20Rik, AI449770, ARR19, C32, CKLF3, CKLF4, CKLF5, Cklf, Cklf1, Cklfsf2-1b, Cklfsf2a, UCK-1	18.8kb	Anti-sense	Chr. - 104281042 - 104293181 on Build GRCm38

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