Product Details

SNP ID

rs116178293

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.6:36249272 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TTACATTCTTCCTTTTATTTCCTGA[G/T]AACTAAAAAATATTATACACACTGG

Phenotype

MIM: 612121

Polymorphism

G/T, Transversion Substitution

Allele Nomenclature

Literature Links

PNPLA1 PubMed Links

Additional Information

For this assay, SNP(s) [rs142009125] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

PNPLA1

Gene Name

patatin like phospholipase domain containing 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001145716.2		Intron			NP_001139188.1
NM_001145717.1		Intron			NP_001139189.2
NM_173676.2		Intron			NP_775947.2
XM_011514519.2		Intron			XP_011512821.1
XM_011514520.2		Intron			XP_011512822.1
XM_017010776.1		Intron			XP_016866265.1
XM_017010777.1		Intron			XP_016866266.1
XM_017010778.1		Intron			XP_016866267.1
XM_017010779.1		Intron			XP_016866268.1

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