Product Details

SNP ID

rs145520090

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.2:119680952 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CAGGCCTGTTTGGAGTTCCAATCTC[A/G]TACCACCTCTTCCCGGATCCCGTGG

Phenotype

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

CFAP221 PubMed Links

Additional Information

For this assay, SNP(s) [rs13011768] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CFAP221

Gene Name

cilia and flagella associated protein 221

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001271049.1	231	Intron			NP_001257978.1
XM_006712353.3	231	Intron			XP_006712416.1
XM_017003550.1	231	Intron			XP_016859039.1
XM_017003551.1	231	Intron			XP_016859040.1
XM_017003552.1	231	Intron			XP_016859041.1
XM_017003553.1	231	Intron			XP_016859042.1
XM_017003554.1	231	Intron			XP_016859043.1
XM_017003555.1	231	Intron			XP_016859044.1
XM_017003556.1	231	Intron			XP_016859045.1
XM_017003557.1	231	Intron			XP_016859046.1
XM_017003558.1	231	Intron			XP_016859047.1
XM_017003559.1	231	Intron			XP_016859048.1

Gene

TMEM177

Gene Name

transmembrane protein 177

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001105198.1	231	Silent Mutation	TCA,TCG	S33S	NP_001098668.1
NM_001105199.1	231	Silent Mutation	TCA,TCG	S33S	NP_001098669.1
NM_030577.2	231	Silent Mutation	TCA,TCG	S33S	NP_085054.2

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