Product Details

SNP ID

rs201111481

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:43557380 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TTCCCACATTGCTCACATTTGTAGG[A/G]TTTTTCTTCTGTGTGGTCTCTCTGA

Phenotype

MIM: 601069

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

ZNF239 PubMed Links

Additional Information

For this assay, SNP(s) [rs2230661] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

ZNF239

Gene Name

zinc finger protein 239

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001099282.1	871	Missense Mutation	CCC,TCC	P234S	NP_001092752.1
NM_001099283.1	871	Missense Mutation	CCC,TCC	P234S	NP_001092753.1
NM_001099284.1	871	Missense Mutation	CCC,TCC	P234S	NP_001092754.1
NM_001324347.1	871	Missense Mutation	CCC,TCC	P234S	NP_001311276.1
NM_001324348.1	871	Missense Mutation	CCC,TCC	P234S	NP_001311277.1
NM_001324349.1	871	Missense Mutation	CCC,TCC	P234S	NP_001311278.1
NM_001324350.1	871	Missense Mutation	CCC,TCC	P234S	NP_001311279.1
NM_001324351.1	871	Missense Mutation	CCC,TCC	P234S	NP_001311280.1
NM_001324352.1	871	Missense Mutation	CCC,TCC	P276S	NP_001311281.1
NM_001324353.1	871	Missense Mutation	CCC,TCC	P347S	NP_001311282.1
NM_005674.2	871	Missense Mutation	CCC,TCC	P234S	NP_005665.2
XM_005271832.2	871	Missense Mutation	CCC,TCC	P234S	XP_005271889.1
XM_006718001.2	871	Missense Mutation	CCC,TCC	P276S	XP_006718064.1
XM_006718003.3	871	Missense Mutation	CCC,TCC	P234S	XP_006718066.1
XM_011540232.2	871	Missense Mutation	CCC,TCC	P378S	XP_011538534.1
XM_011540234.2	871	Missense Mutation	CCC,TCC	P276S	XP_011538536.1
XM_011540235.2	871	Missense Mutation	CCC,TCC	P276S	XP_011538537.1
XM_011540236.2	871	Missense Mutation	CCC,TCC	P276S	XP_011538538.1
XM_011540237.2	871	Missense Mutation	CCC,TCC	P276S	XP_011538539.1
XM_011540238.2	871	Missense Mutation	CCC,TCC	P234S	XP_011538540.1
XM_017016740.1	871	Missense Mutation	CCC,TCC	P276S	XP_016872229.1

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